刘建晓

姓名

刘建晓

性别



职称

副教授 博导

学位

博士

电话

13476095649

邮箱

liujianxiao@mail.hzau.edu.cn

工作单位

华中农业大学 信息学院

研究方向

机器学习、数据挖掘、生物信息计算

主要职历


2016.12--至今 华中农业大学 信息学院 计算机科学系 副教授

2015.06--2020.12 华中农业大学 作物遗传改良国家重点实验室 博士后

2014.07--2016.12  华中农业大学 信息学院 计算机科学系 讲师

2012.07--2014.06  华中农业大学 理学院 计算机科学与技术系 讲师


科研成果


科研项目:

(1). 互联网+环境下融合多组学数据剖析玉米穗部性状的遗传基础,校自主科技创新基金,编号2662018JC0302018/01-2020/12,主持

(2). 水稻、玉米和小麦产量共性性状的遗传网络解析,国家自然科学基金重大研究计划项目,编号919353022020/01-2021/12,主持(子课题)

(3). 作物规模化基因鉴定与基因组育种技术平台-玉米生物组数据库的建设与应用,国家重点研发计划子课题,编号2016YFD01010012016/07-2021/06,主持

(4). 玉米优异种质资源形成与演化规律研究-基于MAGIC群体的玉米骨干亲本重要基因组区段遗传效应解析,国家重点研发计划子课题,编号2016YFD01003032016/07-2021/06,主持

(5). 基于三阶段依赖分析的基因挖掘方法及其在玉米类胡萝卜素遗传解析中的应用,国家自然科学基金青年项目,编号31601078 2017/01-2019/12,主持

(6). 基于贝叶斯网络的基因挖掘方法研究-以玉米穗部性状为例,湖北省自然科学基金,编号2016CFB2312017/01-2018/12,主持

(7). 基于LDAWeb服务组织与选择方法,江苏省网络监控工程中心开放基金,编号KJR15192015/07-2017/07,主持

(8). 长江上游珍稀特有鱼类保护数据扩展(子课题),企事业单位委托科技项目,2016/04-2018/04,主持

(9). 面向变粒度的服务组织与演化方法研究,武汉大学软件工程国家重点实验室开放基金,编号SKLSE2012-09-242013/01-2014/12,主持

(10). 教育部互联网应用创新开放平台示范基地(气象云平台及应用)开放基金,编号KJRP14032014/11-2016/06 ,主持

(11). 基于RDB中连接操作的Web服务聚合研究,华中农业大学自主科技创新基金(青年教师科技创新专项),编号2013QC0202013/04-2014/12,主持

(12). 面向特定领域问题的服务组织与推荐研究,华中农业大学新进博士科研启动专项,编号2012BQ0312012/09-2013/12,主持


教改项目:

(1). 面向生物大数据处理的数据库原理课程课件优化与应用,院教改项目,2015/06-2015/12   主持


科研论文:

(1). Jianxiao Liu#, Jiying Li, Hai Wang*, Jianbing Yan*. Application of deep learning in genomics. Science China Life Sciences, 63(12), pp.1860-1878, 2020 (SCI, IF=4.611, 中科院1, DOI: 10.1007/s11427-020-1804-5)

(2). Jianxiao Liu*, Zonglin Tian, Yingjie Xiao, Haijun Liu, Songlin Hao, Xiaolong Zhang, Chaoyang Wang, Jianchao Sun, Huan Yu, Jianbing Yan. Gene Regulatory Relationship Mining Using Improved Three-Phase Dependency Analysis Approach, IEEE-ACM Transactions on Computational Biology and Bioinformatics, 17(1), pp.339-346, 2020 (SCI, IF=2.896, CCF B类推荐期刊, DOI: 10.1109/TCBB.2018.2872993)

(3). Juncheng Guo, Min Jin, Yuanyuan Chen, Jianxiao Liu*. An embedded gene selection method using knockoffs optimizing neural network. BMC Bioinformatics, 21(1): 414, 2020 (SCI, IF=3.242, CCF C类推荐期刊, DOI: 10.1186/s12859-020-03717-w)

(4).  Jianxiao Liu*, Yu Kang, Kai Liu, Xuan Yang, Menghai Sun, Junfan Hu. Maize Carotenoid Gene Locus Mining Based on Conditional Gaussian Bayesian Network. IEEE Access, 8, pp.15223-15231, 2020 (SCI, IF=4.098, 中科院2, DOI: 10.1109/ACCESS.2020.2966590)

(5). Jingyun Luo, Chengcheng Wei, Haijun Liu, Shikun Cheng, Yingjie Xiao, Xiaqing Wang, Jianbing Yan, Jianxiao Liu*. MaizeCUBIC: a comprehensive variation database for a maize synthetic population, Database-The Journal of Biological Databases and Curation, baaa044, 1-8, 2020 (SCI, IF=2.593, 中科院2, DOI: 10.1093/database/baaa044)

(6). Liguang Wang#, Yujia Wang#, Yi Fu, Yunge Gao, Jiawei Du, Chen Yang, Jianxiao Liu*. AFSBN: A Method of Artificial Fish Swarm Optimizing Bayesian Network for Epistasis Detection, IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2019 (SCI, IF=2.896, CCF B类推荐期刊, DOI: 10.1109/TCBB.2019.2949780)

(7). Yang Guo#, Zhiman Zhong#, Chen Yang, Jiangfeng Hu, Yaling Jiang, Zizhen Liang, Hui Gao, Jianxiao Liu*. Epi-GTBN: an approach of epistasis mining based on genetic Tabu algorithm and Bayesian network. BMC Bioinformatics, 20(1): 444, 2019 (SCI, IF=2.511, CCF C类推荐期刊, DOI: 10.1186/s12859-019-3022-z)

(8). Chen Yang#, Hui Gao#, Xuan Yang, Suiyu Huang, Yulong Kan, Jianxiao Liu*. BnBeeEpi: An Approach of Epistasis Mining Based on Artificial Bee Colony Algorithm Optimizing Bayesian Network. IEEE International Conference on Bioinformatics and Biomedicine(BIBM), 2019 (CCF B类推荐会议, http://106.14.132.202/index)

(9). Qingchun Pan, Junfeng Wei, Feng Guo, Suiyong Huang, Yong Gong, Hao Liu, Jianxiao Liu*, Lin Li*. Trait ontology analysis based on association mapping studies bridges the gap between crop genomics and Phenomics. BMC Genomics, 20:443, 2019 (SCI, IF=3.501, 中科院2, http://tas.hzau.edu.cn/, DOI: 10.1186/s12864-019-5812-0)

(10). Yaling Jiang, Zizhen Liang, Hui Gao, Yang Guo, Zhiman Zhong, Chen Yang, Jianxiao Liu*. An Improved Constraint-Based Bayesian Network Learning Method Using Gaussian Kernel Probability Density Estimator, Expert Systems With Applications, 113, pp.544-554, 2018 (SCI, IF=4.292, CCF C类推荐期刊, DOI: 10.1016/j.eswa.2018.06.058)

(11). Jianxiao Liu*, Zonglin Tian. Verification of Three-Phase Dependency Analysis Bayesian Network Learning Method for Maize Carotenoid Gene Mining. BioMed Research International, 2017(8), pp.1-10, 2017 (SCI, IF=2.197, 中科院2, DOI: 10.1155/2017/1813494)

(12). Haijun Liu, Fan Wang, Yingjie Xiao, Zonglin Tian, Weiwei Wen, Xuehai Zhang, Xi Chen, Nannan Liu, Wenqiang Li, Lei Liu, Jie Liu, Jianbing Yan, Jianxiao Liu*. MODEM: Multi-omics data envelopment and mining in maize. Database: The Journal of Biological Databases and Curation, 2016, baw117, 2016 (SCI, IF=2.627, 中科院3, http://modem.hzau.edu.cn/, DOI: 10.1093/database/baw117)

(13). Jianxiao Liu*, Zhihua Xia. An Approach of Web Service Organization Using Bayesian Network Learning. Journal of Web Engineering, 16(3&4), pp.252-276, 2017 (SCI, IF=0.311, CCF C类推荐期刊)

(14). Jianxiao Liu, Xiaoxia Li, Zhihua Xia*. Web service aggregation and selection based on join operation in RDB, Journal of Internet Technology, 99(99), pp.1-17, 2015 (SCI, IF=0.418, DOI: 10.6138/JIT.2018.19.1.20150930)

(15). Jianxiao Liu, Feng Liu, Xiaoxia Li, Keqing He, Yutao Ma, Jian Wang*. Web Service Clustering Using Relational Database Approach, International Journal of Software Engineering and Knowledge Engineering(IJSEKE), 25(8), pp.1365-1393, 2015 (SCI, IF=0.264, CCF C类推荐期刊, DOI: 10.1142/S021819401550028X)

(16). Jianxiao Liu, Jian Wang, Keqing He, Feng Liu, Xiaoxia Li*. Service Organization and Recommendation Using Multi-granularity Approach, Knowledge-Based Systems, 73, pp.181-198, 2015 (SCI, IF=3.058, CCF C类推荐期刊, DOI:10.1016/j.knosys.2014.10.002)

(17). Jianxiao Liu, Zonglin Tian, Yifei Liu, Liang Zhao*. Research of Web service Recommendation Using Bayesian network Reasoning, 2018 International Conference on Services Computing(SCC), 2018.6.25-30, Seattle, USA, 2018 (EI, Research Track, CCF C类推荐会议)

(18). Xuan Yang, Jianxiao Liu*. Using Join Operation in Relational Database to Composite Web Services, 2018 World Congress on Services, 2018.6.25-30, Seattle, USA, 2018 (EI, Application Track)

(19). Jianxiao Liu*, Chaoyang Wang, Haijun Liu, Yingjie Xiao, Songlin Hao, Xiaolong Zhang, Jianchao Sun, Huan Yu. Maize Gene Regulatory Relationship Mining Using Association Rule, The 9th International Symposium on Intelligence Computation and Applications (ISICA), 2017.11.18-19, Guangzhou, China, 2017 (EI)

(20). Yu Kang, Xuan Yang, Menghai Sun, Junfan Hu, Zhiman Zhong, Jianxiao Liu*. Comparison of Software Packages for Bayesian Network Learning in Gene Regulatory Relationship Mining, The 13th International Conference on Natural Computation, Fuzzy Systems and Knowledge Discovery, 2017.7.29-31, Guilin, China, 2017 (EI)

(21). Jiaoxiao Liu*, Zaiwei Feng, Zonglin Tian, Feng Liu, Xiaoxia Li. Research on Service Organization Based on Decorator Pattern, The 11th EAI International Conference on Collaborative Computing: Networking, Applications and Worksharing, pp. 95-105, 2015.11.10-2015.11.11, 2015 (EI, CCF C类推荐会议)

(22). 刘建晓. 基于本体推理的农业大数据处理方法---以玉米多组学数据分析为例, 第三届农业信息化发展论坛暨新技术交流会, pp. 21-25, 5.13-15, 2016

(23). Jianxiao Liu, Zonglin Tian, Panbiao Liu, Jiawei Jiang, Zhao Li*. An Approach of Semantic Web Service Classification Based on Naive Bayes, The 13th International Conference on Services Computing (SCC), 6.27-7.2, San Francisco, USA, pp.356-362, 2016 (EI, Application Track, Accept rate: 27%)

(24). Jianxiao Liu, Songlin Hao, Xiaolong Zhang, Chaoyang Wang, Jianchao Sun, Huan Yu, Zhao Li*. Research on Web Service Dynamic Composition Based on Execution Dependency Relationship, The 12th IEEE World Congress on Services, 6.27-7.2, San Francisco, USA, pp.113-117, 2016 (EI)

(25). Jianxiao Liu, Da Ning, Kai Xing, Zonglin Tian, Panbiao Liu, Feng Liu*. Web Service Aggregation Platform Implementation Based on Join Operation, International Conference on Advances in Mechanical Engineering and Industrial Informatics, 04.11, pp.1126-1130, 2015

(26). 刘建晓, 何克清, 王健*, 余敦辉, 冯在文, 宁达, 张秀伟. RGPS制导的按需服务组织与推荐方法, 计算机学报, 36(2), pp.238-251, 2013 (国内权威, EI)

(27). 刘建晓, 何克清, 王健, 冯在文, 刘峰, 李小霞*.一种基于RDB中自身连接的Web服务聚类方法, 计算机研究与发展, 50(s), pp.205-210, 2013 (国内权威)

(28). Jianxiao Liu, Jian Wang, Keqing He, Feng Liu*, Xiaoxia Li. Using Pi-Calculus to Model Web Service Interaction, Journal of Computational Information Systems, 9(5), pp.1759-1767, 2013 (EI)

(29). 刘建晓, 邓勇, 刘思聪, 张秀伟, 刘峰*. 基于关系数据库的Web服务组合研究, 华中科技大学学报, 41(s), pp.6-9, 2013 (EI)

(30). 刘建晓*, 何克清, 宁达, 张秀伟. 一种基于Skyline的服务选择方法, 小型微型计算机系统, 34(1), pp.9-15, 2013 (CSCD)

(31). Jianxiao Liu, Jian Wang, Feng Liu, Xiaoxia Li, Fang Wu*. The Relational Database Theory and Web Service Technology, International Conference on Management Innovation and Information Technology, 12.07, pp.599-608, 2013 (EI)

(32). Jianxiao Liu*, Keqing He, Da Ning. Web Service Aggregation Using Semantic Interoperability Oriented Method, Journal of Information Science and Engineering, 28(3), pp.437-452, 2012 (SCI, IF=0.333, DOI: 10.1021/ci300201j)

(33). Jianxiao Liu*, Keqing He, Da Ning. A Kind of On-demand Web Services Selection Method Based on RGPS, Journal of Computational Information Systems, 7(1), pp.1-8, 2011 (EI)

(34). Jianxiao Liu*, Keqing He, Jian Wang, Da Ning. A Clustering Method for Web Service Discovery, The 8th International Conference on Services Computing (SCC), 2011.07.4-10, pp.729-730, Washington D.C., 2011 (EI)

(35). Jianxiao Liu*, Keqing He, Jian Wang, Zaiwen Feng, Da Ning. An Extended WS-CDL Method for On-demand Web Service Selection, The 7th World Congress on Services, 2011.07.4-10, pp.327-330, Washington D.C., 2011 (EI)

(36). 刘建晓*, 何克清, 王健, 冯在文, 宁达. 面向领域核心服务定制的部分语义互操作聚类研究, 小型微型计算机系统, 32(9),pp.1703-1708, 2011 (CSCD)

(37). 刘建晓*, 何克清, 王健, 冯在文, 宁达. 一种面向语义互操作性的服务聚合方法, 软件学报, 22(s2), pp.27-40, 2011 (国内权威, EI)

(38). 刘建晓, 何克清*, 宁达. 一种面向Web服务的语义匹配方法, 武汉大学学报, 56(4), pp.467-472, 2010 (CSCD)  

(39). Jianxiao Liu*, Lijuan Li. Research of distributed intrusion detection system model based on mobile agent, International Forum on Information Technology and Applications, IFITA 2009, 2009/5/15-2009/5/17, pp 53-57, Chengdu, China, 2009 (EI)

(40). Jianxiao Liu*, Lijuan Li. A distributed intrusion detection system based on agents, Pacific-Asia Workshop on Computational Intelligence and Industrial Application, PACIIA 2008, 2008/12/19-2008/12/20, pp 553-557, Wuhan, China, 2008 (EI)


软件著作权:

(1). 刘建晓, 罗靓赟, 王昕, 陈时坤, 严建兵. 玉米CUBIC群体数据整合与分析系统平台V1.0,软件著作权登记号:2019SR0156468

(2). 刘建晓钟琦,宋琦敏. 基因本体解析与编辑系统V1.0,软件著作权登记号:2018SR578754

(3). 刘建晓,刘海军,王凡,田宗霖,严建兵. 玉米多组学数据整合与分析系统平台V1.0,软件著作权登记号:2017SR128806

(4). 徐强,王沦,刘建晓,卢敏,邓秀新. 柑橘身份证数据库及品种DNA鉴定在线软件CitrusID V1.0,软件著作权登记号:2017SR054900

(5). 王健,刘建晓. CloudCRM客户关系管理云服务平台V1.0,软件著作权登记号:2011SR048707


发明专利:

(1). 刘建晓,杨轩,杨晨,雷继萌.一种整数线性规划优化贝叶斯网络的上位性位点挖掘方法. 申请号: 202010592324.4

(2). 刘建晓,阚裕隆, 杨晨,杨轩, 王李光. 一种基于k-tree优化贝叶斯网络的上位性位点挖掘方法. 申请号: 202010683358.4

(3). 刘建晓,杨晨,高辉,杨轩,黄穗宇,阚裕隆. 一种人工蜂群优化贝叶斯网络的上位性位点挖掘方法. 2019.10,申请号:201910859461.7

(4). 刘建晓,向宇嘉,田宗霖,郝松林,张小龙. 一种基于贝叶斯网络推理的基因间交互关系挖掘方法. 2018.10,申请号:201811157185.1

(5). 刘建晓,果杨,钟芷漫,杨晨,胡江峰,蒋雅玲,梁子珍,高辉. 一种基于遗传禁忌和贝叶斯网络的上位性位点挖掘方法. 2018.10,申请号:201811287261.0

(6). 何克清,刘建晓,王健,冯在文,张秀伟. 一种基于按需服务组织的推荐方法,2013.11.06,专利号: ZL201210406142.9


奖励与其他:

(1). 指导学生获得2020年校优秀学士学位论文1项,2019年校优秀学士学位论文2项,2015年湖北省优秀学士学位论文奖1项,2015年校本科生毕业论文(设计)创新奖1

(2). 指导学生SRF项目2国家大学生创新创业训练计划项目4本科生科技创新专项3

(3). 指导学生获得国家大学生创新创业训练计划“十佳项目”2大学生创新创业“十佳作品”2

(4). 指导学生获得2017年中国大学生计算机设计大赛三等奖1 项,2015年蓝桥杯一等奖1项、三等奖2

(5). 刘建晓,何克清,王健,余敦辉冯在文宁达张秀伟. 中国计算机学会服务计算专委会最佳学生论文奖2012.8

(6). 刘建晓. 武汉大学,研究生学术创新奖,二等奖,2012.4

(7). 获得2020年教学质量一等奖,2019教学质量二等奖,2015教学质量二等奖2015教学质量三等奖

(8). 获得院第一届青年教师讲课竞赛二等奖,校第十二届青年教师讲课竞赛优胜奖

(9). 获得2019年校教学实习优秀指导老师

(10). 获得湖北省第五批“博士服务团”工作先进个人


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